Protein ZmIAA21
ZmIAA21 is a protein in the Aux/IAA family.
Information
Coreg Name: ZmIAA21
Species: Maize
Coreg Family: Aux/IAA
Gene Name(Synonym): IAA28
Uniprot ID: B4F9B9
Subgenome: 1

Protein ZmIAA21

ZmIAA21 is a protein in the Aux/IAA family.

Overview of domains present in v5 transcripts
PF02309
Zm00001eb284310_T002
Zm00001eb284310_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d037774DAPseq no logo sequence fimo position
Zm00001d037774DAPseq no logo sequence fimo position
Zm00001d037774ChIPseq no logo sequence fimo position
Zm00001d037774PChIPseq no logo sequence fimo position

Interactions where ZmIAA21 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmIAA21 is the target  
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There are 52 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb284310_T002 from maize genome v5

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKLLSPGVLCRAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYL
RKIDLKTYKNYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIG
LAPRAADKSKNRN

MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKLLSPGVLCRAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYL
RKIDLKTYKNYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIG
LAPRAADKSKNRN

MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKLLSPGVLCRAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYL
RKIDLKTYKNYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIG
LAPRAADKSKNRN

MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKLLSPGVLCRAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYL
RKIDLKTYKNYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIG
LAPRAADKSKNRN

MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKLLSPGVLCRAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYL
RKIDLKTYKNYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIG
LAPRAADKSKNRN

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02309
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Nucleotide Sequence
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CGCTTCGACTCCCACTCCCACTCTC...

GRMZM2G147243_T01 from maize genome v3


Related TFome: pUT5342

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGEMSRVTLLSRMARQYVIVFHFDVDGVRSTSRSL

Nucleotide Sequence
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GTGGACTCACATGTAAGTGAGATAG...

GRMZM2G147243_T02 from maize genome v3

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIGLAPRAADKS
KNRN

Nucleotide Sequence
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GTGGACTCACATGTAAGTGAGATAG...

Zm00001d037774_T001 from maize genome v4

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIGLAPRAADKS
KNRN

Nucleotide Sequence
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AAACAAACCACTCTTCGCTTCGACT...

Zm00001d037774_T002 from maize genome v4

Amino Acid Sequence
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MTFAGSVTENHLWKFCAFEGNKRVGVNCILGDLSLSLSLSLSLSLSLSGLGISDLFLLFFRWEFRFVLRPRGGKLKLQLC
YVLLKSHFSSKFSTFLNGLFQFVFSFLGFFFTFVACSKALLIFSLLSLICFFLYFVHNILVSHYLVQTLQLSSQKSPNFF
VLYSIS

Nucleotide Sequence
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ACTCCCACTCTCCCTTTCCACTCTC...

Zm00001d037774_T003 from maize genome v4

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIGLA
PRAADKSKNRN

Nucleotide Sequence
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ACTCTCCCTTTCCACTCTCAGGCTC...

Zm00001d037774_T004 from maize genome v4

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGEMSRVTLLSRMARQYVIVFHFDVDGVRSTSRSL

Nucleotide Sequence
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ACACACAAACAGCCACTCCTCACCT...

Zm00001d037774_T005 from maize genome v4

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGEMSRVTLLSRMARQYVIVFHFDVDGVRSTSRSL

Nucleotide Sequence
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ACACACAAACAGCCACTCCTCACCT...

Zm00001eb284310_T001 from maize genome v5

Amino Acid Sequence
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MSPPLDLDYIGLSPAAAAAAAHDDLKGTELRLGLPGSGSPDRRVVAATATTLDLLPAKGAKRGFSDEAPTPSPGAASGKG
KKVAEEEDDKKVAATPQPVAKAQVVGWPPIRSYRKNTMSTTQLKGSKEDAEAKQDQGFLYVKVSMDGAPYLRKIDLKTYK
NYKDLSTALEKMFSGFSTGKDGLSEYRKDGEYVLTYEDKDGDWMLVGDVPWEMFADSCRRLRIMKGSDAIGLAPRAADKS
KNRN

Nucleotide Sequence
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CTCTTCGCTTCGACTCCCACTCCCA...


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